Titer bar plots.

Barplot plots the baseline and day 28 titers

Barplot(dat_list, subjectCol = "SubjectID", cols = 1, groupVar = NULL,
  colors = c("#A6CEE3", "#1F78B4", "#B2DF8A", "#33A02C", "#FB9A99", "#E31A1C",
  "#FDBF6F", "#FF7F00"))

Arguments

dat_list	a named list like the one returned by FormatTiters.
subjectCol	the name of the column specifying a subject ID. Default is "SubjectID".
cols	numeric specifying how many columns to layout plot
groupVar	an optional character string specifying a grouping variable. May be either a variable in dat_list or an endpoint. Default is NULL
colors	a vector of colors specifying bar colors. If dat_list contains more than 4 elements, you must specify your own colors.

Value

(invisibly) a list of ggplot2 object(s).

Examples

## Prepare the data
titer_list <- FormatTiters(Year1_Titers)
#> - Log transforming Pre and Post columns
#> - Setting any negative log fold changes to 0

## Bar plot of a single strain
Barplot(titer_list["A California 7 2009"])

## Bar plot of all 3 strains
Barplot(titer_list)

## Can improve readability of previous plot by separating into groups
## For example, group by AgeGroup
Barplot(titer_list, groupVar = "AgeGroup")